The polarizing effect depends on the relative angle between the sun, the surface the glare is coming from, the direction of the camera, and the orientation of the polarizer. This is why they never mark one direction as "UP."
If you stood in the middle of a huge empty bowl, like a swimming pool or a smooth concrete skate park, and you held the polarizer up to your eye, you might notice less glare off SOME of the surfaces around you. If you twist the polarizer, SOME surfaces get their original glare back, and SOME different surfaces start getting less glare. If you walk around the environment and repeat the process, or you try the process at different times of day, which surfaces have more glare and which surfaces have less glare, will CHANGE. This goes for leaves on a tree, bright car paint jobs, windshields, all sorts of semi-glossy surfaces around you.
Before you fly with a polarized filter, you should try to stand facing the direction you'll shoot, look at the things you'll shoot, twist the polarizer to your eye, find a favorite position, put it on the drone camera, and fly. You can only hope that the altitude angle change doesn't throw all that out the window.
Polarized filters on drones will remain a mystery gamble, until you can interactively roll the filter orientation without rolling the camera.
I decided that rather than try to chase my tail like that I would enjoy the ND effect of the filter and hope that the polarizing aspect would be correctly oriented by chance sometimes. I don't ever plan shots where I'm only shooting from one angle for the whole flight.