But they WILL allow them in carry on without LiPo bags. I am assuming the idea is that if there is a fire within the cabin as a result of a LiPo it can be handled using the proper method to extinguish. In checked baggage in the cargo hold of a plane such a fire could go un-noticed and become catastrophic.
I just got back from a RT from DAL to SFO. On the westbound flight, I had discharged them, had them in bags with terminal covers, and laid them in their own tray when I went thru TSA. Nobody paid them any mind. If your LiPo batts are in your carryon, the airline won't even know you have them. On the return trip, I just left them in my carryon (though discharged, bagged, with terminals covered). TSA only asked me about electronics. Guess TSA doesn't worry about LiPos anymore either.